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Signal Transduction
Expasy Signalling
Gateway
Biocarta
National Institute Aging
Reactome (curated resource or core
pathways)
cell Signal
BIND
See also Receptors
See also Enzyme linked receptors See also Toll-like Receptors
The detection and interpretation of
signals from the environment are necessary features of all
cells. Although there are an enormous number of
different signal-transduction pathways, some very common processes include the
following:
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Signal/receptor interaction:
signal transduction starts with the interaction between a signal and its
receptor. Signals which cannot penetrate the
cell membrane like water soluble molecules and membrane bound ligands (such as
MHC-peptide complexes) bind to receptors on the surface of the
cell membrane. Hydrophobic signals, such as
steroids, that can diffuse through the cell membrane are bound by
intracellular receptors.
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G proteins: Signals are often
transduced through G proteins.
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Second messengers: Signal
reception often leads to the generation within the cell of a "second
messenger" that can diffuse to other sites in the cell and evoke changes.
Examples are cylcik nucleotides (cAMP, cGMP), calcium ion and membrane
phospholipid derivatives like diacylglycerol (DAG) and inositol triphosphate
(IP3)
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Protein kinases and phasphatases are
activated or inhibited. Kinases catalyze the phosphorylation of target residues
(tyrosine, serine, or threonine) of key elements in many signal transduction
pathways. Protein phosphorylation is used in many different ways to control
the activity of transcription factors. It directs subcellular localization,
selectively controls binding of dimerization partners (e.g., signal
transducers and activators of transcription), or alters transcriptional
activity by facilitating the interaction with components of the transcriptional
machinery (e.g., cyclin AMP-responsive element binding protein, p53 and NFkB. Phosphatases catalyze deposphorylation, reversing the effect of
kinases.
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Adaptor proteins often bind
specifically and simultaneously to 2 or more different molecules with signaling
roles, bringing them together and promoting their combined activity.
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Signals are amplified by enzyme
cascade. Each enzyme in the cascade catalyzes the activation of many copies of
the next enzyme in the sequence, greatly amplifying the signal at each step
and providing many ways to modulate the intensity of the signal along the way.
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The default setting for signal
transduction pathways is usually off. In the absence of an appropriately
presented signal, transmission through the pathway does not take place.
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Activation of Transcription Factors
is one of the most common responses to receptor engagement.
Among the
transcription factors, the active heterodimer p50/p65 form of nuclear factor
(NF)-Κβ plays a central role in immunological process by
inducing expression of a variety of genes involved in inflammatory responses.
Other transcription factors are regulated by signal transduction pathways that
involve enzymatic cascades of mitogen-activated protein
(MAP) kinases which are activated by many
receptors and environmental stresses.
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